Name: Microbial community in marine sediments
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

16S rRNA amplicon sequencing on the Eastern South Pacific Ocean sediments

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00002583.zip

Contacts:

University of Massachusetts Dartmouth
University of Massachusetts Dartmouth

17,301

occurrence records

726

taxa

species

Taxa

Missing and invalid fields

Field	Missing	Invalid
coordinateUncertaintyInMeters	17,301		100.0%
maximumDepthInMeters		13,871	80.2%
minimumDepthInMeters		13,871	80.2%
occurrenceStatus	17,301		100.0%
scientificNameID	17,301		100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
NO_DEPTH	13,871	80.2%
NO_MATCH	7,339	42.4%
MARINE_UNSURE	1,655	9.6%
WORMS_ANNOTATION_UNRESOLVABLE	56	0.3%
NOT_MARINE	39	0.2%
NO_ACCEPTED_NAME	9	0.1%

Microbial community in marine sediments

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data