Dataset

ARMS-MBON data on long-term monitoring of hard-bottom communities: COI results from 2018-2020

EurOBIS OBIS UK MeasurementOrFact DNADerivedData Open in mapper Explore occurrences

ARMS-MBON is a network of more than 25 partners who deploy Autonomous Reef Monitoring Structures (ARMS) settlement units in the vicinity of marine stations and Long-term Ecological Research sites in European coastal waters and Ant/arctica. After a few months the units are brought up, and visual, photographic, and genetic assessments are made of the lifeforms that settled on them. The collected data are published (see the related datasets and GitHub links listed in this record) and the omics data analysed. 

In this record we include the outputs of our analysis of the COI data from 2018-2020. The analysis used the PEMA bioinformatics software, and the resulting taxonomics inventory has been submitted as DwCA to EurOBIS. In addition, all the PEMA inputs and outputs can be found on the ARMS-MBON GitHub site (see links in this record), and the subset of the sampling data to which these COI results are linked can also be found on the ARMS-MBON GitHub site.

Citation: Obst, M.; Exter, K. M., Pavloudi, C.; Pagnier, J.; Genin, A.; Balazy, P.; Canio, I., Chatzigeorgiou, G., Chatzinikolaou, E.; Chełchowski, M.; Chrismas, N.; Comtet, T., Dailianis, T., Daraghmeh, N.; Deneudt, K.; Deia de Cerio, O.; Digenis, M.; Gerovasileiou, V.; González, J.; Kauppi, L.; Kristoffersen, J. B.; Kukliński, P.; Lasota, R., Liraz, L.; Małachowicz, M.; Mavric, B.; Mortelmans, J.; Paredes, E.; Poćwierz-Kotus, A.; Reiss, H., Santi, I., Sarafidou, G.; Skouradakis, G.; Solbakken, J.; Staehr, P.; Thyrring, J.; Troncosco, J.; Vernadou, E.; Viard, F.; Zafeiropoulos, H.; Zbawicka, M.; (2020): ARMS-MBON data on long-term monitoring of hard-bottom communities: COI results from 2018-2020. 

Published: July 16, 2024 at 09:39

URL: https://ipt.vliz.be/upload/resource?r=arms_coi_2018-20

Matthias Obst
University of Gothenburg; Faculty of Science; Department of Marine Sciences

Flanders Marine Institute (VLIZ)
Flanders Marine Institute (VLIZ)

Christina Pavloudi
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Haris Zafeiropoulos
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Vasilis Gerovasileiou
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Emmanouela Vernadou
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Peter Anton Staehr
University of Aarhus; Faculty of Technical Sciences; Department of Ecoscience

Evangelia Chatzinikolaou
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Jesús Souza Troncoso
University of Vigo; Ecology and Animal Biology Department; Facultad de Ciencias do Mar

Estefanía Paredes Rosendo
University of Vigo; Departamento de Ecología y Biología Animal; Station of marine Science of Toralla

Jose González
University of Vigo; Departamento de Ecología y Biología Animal; Station of marine Science of Toralla

Jonas Mortelmans
Vlaams Instituut voor de Zee

Frédérique Viard
Sorbonne Université; Sorbonne Université/CNRS, Station Biologique de Roscoff

Malgorzata Zbawicka
Polish Academy of Sciences; Institute of Oceanology

Magdalena Małachowicz
Polish Academy of Sciences; Institute of Oceanology

Anita Poćwierz-Kotus
Polish Academy of Sciences; Institute of Oceanology

Piotr Kuklinski
Polish Academy of Sciences; Institute of Oceanology

Piotr Balazy
Polish Academy of Sciences; Institute of Oceanology

Maciej Chełchowski
Polish Academy of Sciences; Institute of Oceanology

Nauras Daraghmeh
University of Gothenburg; Faculty of Science; Department of Marine Sciences

Jostein Solbakken
University of Helsinki; Tvärminne Zoological Station

Laura Kauppi
University of Helsinki; Tvärminne Zoological Station

Henning Reiss
Nord University; Faculty of Bioscience and Aquaculture

Ibon Cancio
University of the Basque country; Plentzia Marine Station

Oihane Dias de Cerio
University of the Basque country; Plentzia Marine Station

Borut Mavric
National Institute of Biology; Marine Biological Station Piran

Levy Liraz
The Interuniversity Institute for Marine Sciences Of Eilat

Amatzia Genin
The Interuniversity Institute for Marine Sciences Of Eilat

Thierry Comtet
Sorbonne Université; Sorbonne Université/CNRS, Station Biologique de Roscoff

Ioulia Santi
European Marine Biological Research Centre

Jon Bent Kristoffersen
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Rafal Lasota
University of Gdansk; Faculty of Biology, Geography and Oceanology; Institute of Oceanography

Jakob Thyrring
University of Aarhus; Faculty of Technical Sciences; Department of Ecoscience

19,402
occurrence records
232,824
measurements and facts
19,402
sequences
1,761
taxa
1,758
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 19,402
100.0%
scientificNameID 6,860
35.4%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_MATCH 6,860
35.4%
DEPTH_EXCEEDS_BATH 2,405
12.4%
ON_LAND 1,685
8.7%
NO_ACCEPTED_NAME 1,239
6.4%
NOT_MARINE 1,147
5.9%
MARINE_UNSURE 648
3.3%

Measurement types

DNA derived data