Dataset

ARMS-MBON data on long-term monitoring of hard-bottom communities: 18S results from 2018-2020

EurOBIS OBIS UK MeasurementOrFact DNADerivedData Open in mapper Explore occurrences

ARMS-MBON is a network of more than 25 partners who deploy Autonomous Reef Monitoring Structures (ARMS) settlement units in the vicinity of marine stations and Long-term Ecological Research sites in European coastal waters and Ant/arctica. After a few months the units are brought up, and visual, photographic, and genetic assessments are made of the lifeforms that settled on them. The collected data are published (see the related datasets and GitHub links listed in this record) and the omics data analysed. 

In this record we include the outputs of our analysis of the 18S data from 2018-2020. The analysis used the PEMA bioinformatics software, and the resulting taxonomics inventory has been submitted as DwCA to EurOBIS. In addition, all the PEMA inputs and outputs can be found on the ARMS-MBON GitHub site (see links in this record), and the subset of the sampling data to which these COI results are linked can also be found on the ARMS-MBON GitHub site.

Citation: Obst, M.; Exter, K.M.; Pavloudi, C.; Pagnier, J.; Genin, A.; Balazy, P.; Broudin, C.; Cancio, I.; Chełchowski, M.; Chrismas, N.; Comtet, T.; Dailianis, T.; Daraghmeh, N.; Deneudt, K.; Diaz de Cerio, O.; González, J.; Kauppi, L.; Kristoffersen, J.B.; Kukliński, P.; Lasota, R.; Lévêque, L.; Liraz, L.; Loisel, S.; Małachowicz, M.; Mavric, B.; Mortelmans, J.; Paredes Rosendo, E.; Poćwierz-Kotus, A.; Reiss, H.; Santi, I.; Solbakken, J.; Souza Troncoso, J.; Staehr, P.; Tajadura, J.; Thyrring, J.; Viard, F.; Zafeiropoulos, H.; Zbawicka, M.; University of Gothenburg, Faculty of Science, Department of Marine Sciences: Sweden; Flanders Marine Institute: Belgium; Hellenic Centre for Marine Research, Institute of Marine Biology, Biotechnology and Aquaculture: Greece; The Interuniversity Institute for Marine Sciences Of Eilat: Israel; Polish Academy of Sciences, Institute of Oceanology: Poland; Sorbonne Université, Station Biologique de Roscoff: France; University of the Basque country, Plentzia Marine Station: Spain; Marine Biological Association of the UK: United Kingdom; University of Vigo, Ecology and Animal Biology Department, Station of marine Science of Toralla: Spain; University of Helsinki, Tvärminne Zoological Station: Finland; University of Gdansk, Faculty of Biology, Geography and Oceanology, Institute of Oceanography: Poland; National Institute of Biology, Marine Biological Station Piran: Slovenia; Nord University, Faculty of Bioscience and Aquaculture: Norway;  European Marine Biological Research Centre: France; University of Vigo, Ecology and Animal Biology Department, Faculty of Marine Sciences: Spain; University of Aarhus, Faculty of Technical Sciences, Department of Ecoscience: Denmark; (2020): ARMS-MBON data on long-term monitoring of hard-bottom communities: 18S results from 2018-2020

Published: July 10, 2024 at 06:57

URL: https://ipt.vliz.be/upload/resource?r=arms_18s_2018-20

Matthias Obst
University of Gothenburg; Faculty of Science; Department of Marine Sciences

Christina Pavloudi
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Justine Pagnier
University of Gothenburg; Faculty of Science; Department of Marine Sciences

Amatzia Genin
The Interuniversity Institute for Marine Sciences Of Eilat

Piotr Balazy
Polish Academy of Sciences; Institute of Oceanology; Departement of Marine Ecology

Maciej Chełchowski
Polish Academy of Sciences; Institute of Oceanology; Departement of Marine Ecology

Piotr Kuklinski
Polish Academy of Sciences; Institute of Oceanology; Departement of Marine Ecology

Stéphane Loisel
Sorbonne Université; Sorbonne Université/CNRS, Station Biologique de Roscoff

Magdalena Małachowicz
Polish Academy of Sciences; Institute of Oceanology; Departement of Marine Ecology

Anita Poćwierz-Kotus
Polish Academy of Sciences; Institute of Oceanology; Departement of Marine Ecology

Ibon Cancio
University of the Basque country; Plentzia Marine Station

Malgorzata Zbawicka
Polish Academy of Sciences; Institute of Oceanology; Departement of Marine Ecology

Levy Liraz
The Interuniversity Institute for Marine Sciences Of Eilat

Frédérique Viard
Sorbonne Université; Sorbonne Université/CNRS, Station Biologique de Roscoff

Caroline Broudin
Sorbonne Université; Sorbonne Université/CNRS, Station Biologique de Roscoff

Thierry Comtet
Sorbonne Université; Sorbonne Université/CNRS, Station Biologique de Roscoff

Oihane Diaz de Cerio
University of the Basque country; Plentzia Marine Station

Laurent Lévêque
Sorbonne Université; Sorbonne Université/CNRS, Station Biologique de Roscoff

Javier Tajadura
University of the Basque country; Plentzia Marine Station

Jonas Mortelmans
Vlaams Instituut voor de Zee

Thanos Dailianis
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Jon Bent Kristoffersen
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Haris Zafeiropoulos
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture

Nauras Daraghmeh
University of Gothenburg; Faculty of Science; Department of Marine Sciences

Jose González
University of Vigo; Departamento de Ecología y Biología Animal; Station of marine Science of Toralla

Estefanía Paredes Rosendo
University of Vigo; Departamento de Ecología y Biología Animal; Station of marine Science of Toralla

Jesús Souza Troncoso
University of Vigo; Departamento de Ecología y Biología Animal; Station of marine Science of Toralla

Laura Kauppi
University of Helsinki; Tvärminne Zoological Station

Jostein Solbakken
University of Helsinki; Tvärminne Zoological Station

Rafal Lasota
University of Gdansk; Faculty of Biology, Geography and Oceanology; Institute of Oceanography

Borut Mavric
National Institute of Biology; Marine Biological Station Piran

Henning Reiss
Nord University; Faculty of Bioscience and Aquaculture

Peter Anton Staehr
University of Aarhus; Faculty of Technical Sciences; Department of Ecoscience

Jakob Thyrring
University of Aarhus; Faculty of Technical Sciences; Department of Ecoscience

Flanders Marine Institute (VLIZ)
Flanders Marine Institute (VLIZ)

Ioulia Santi
European Marine Biological Research Centre

21,482
occurrence records
193,338
measurements and facts
21,482
sequences
921
taxa
114
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 21,482
100.0%
scientificNameID 1,250
5.8%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
DEPTH_EXCEEDS_BATH 2,957
13.8%
ON_LAND 1,699
7.9%
NO_MATCH 1,250
5.8%
NO_ACCEPTED_NAME 328
1.5%
MARINE_UNSURE 298
1.4%
NOT_MARINE 22
0.1%

Measurement types

DNA derived data