Name: Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

Latitudinal transect of the Atlantic Ocean, depth range from 20-200m, size fractioned by filtering (0.22, 3, 8 µm). Amplicon Sequencing of the V5-V6 region of the bacterial 16s rRNA Gene.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00001073.zip

Contacts:

HELMHOLTZ CENTRE FOR INFECTION RESEARCH
HELMHOLTZ CENTRE FOR INFECTION RESEARCH

119,885

occurrence records

1,160

taxa

species

Taxa

Missing and invalid fields

Field	Missing
coordinateUncertaintyInMeters	119,885	100.0%
eventDate	119,885	100.0%
occurrenceStatus	119,885	100.0%
scientificNameID	119,885	100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
NO_MATCH	41,292	34.4%
MARINE_UNSURE	13,622	11.4%
NO_ACCEPTED_NAME	361	0.3%
NOT_MARINE	315	0.3%
WORMS_ANNOTATION_UNRESOLVABLE	282	0.2%

Bacterial 16s Amplicon Sequencing of the Atlantic Ocean

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data