Dataset

Picoplankton 18S rRNA gene sequences (V9 region) from Vertical Profiles (surface to 4000m depth) sampled during the Malaspina 2010 circumglobal expedition

Name: Picoplankton 18S rRNA gene sequences (V9 region) from Vertical Profiles (surface to 4000m depth) sampled during the Malaspina 2010 circumglobal expedition
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

OBIS Secretariat Open in mapper Explore occurrences

The study here includes 40 samples (DNA) of the 18S (V9 region, DNA) from the Malaspina-2010 expedition. The samples were sequenced using Illumina MiSeq 2x250bp.

Published: September 22, 2022 at 08:44

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00005717.zip

Contacts:

INSTITUT DE CIENCIES DEL MAR
INSTITUT DE CIENCIES DEL MAR

9,841

occurrence records

791

taxa

102

species

Taxa

Missing and invalid fields

Field	Missing
coordinateUncertaintyInMeters	9,841	100.0%
maximumDepthInMeters	9,841	100.0%
minimumDepthInMeters	9,841	100.0%
occurrenceStatus	9,841	100.0%
scientificNameID	9,841	100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
NO_DEPTH	9,841	100.0%
NO_MATCH	1,977	20.1%
MARINE_UNSURE	506	5.1%
NO_ACCEPTED_NAME	49	0.5%
WORMS_ANNOTATION_UNRESOLVABLE	40	0.4%
NOT_MARINE	20	0.2%
WORMS_ANNOTATION_RESOLVABLE	1	0.0%

Picoplankton 18S rRNA gene sequences (V9 region) from Vertical Profiles (surface to 4000m depth) sampled during the Malaspina 2010 circumglobal expedition

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data