Dataset

deep marine subsurface Raw sequence reads

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The deep sedimentary biosphere, extending hundreds of meters below the seafloor harbors unexpected diversity of Bacteria, Archaea, and microbial eukaryotes. Little is known about microbial eukaryotes in these habitats, however studies suggest that fungi dominate. Here we compared fungal ribosomal RNA signatures present in sediment core samples from 6 and 95mbsf from Peru Margin site 1229A. Fungal-specific PCR primers were used in this study.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00004120.zip

Contacts:

Woods Hole Oceanographic Institution
Woods Hole Oceanographic Institution

216
occurrence records
87
taxa
2
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 216
100.0%
occurrenceStatus 216
100.0%
scientificNameID 216
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
DEPTH_EXCEEDS_BATH 216
100.0%
ON_LAND 216
100.0%
NO_MATCH 52
24.1%
MARINE_UNSURE 14
6.5%
WORMS_ANNOTATION_UNRESOLVABLE 4
1.9%

Measurement types

DNA derived data