Name: Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for prokaryotes or protist.
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

Seawater was filtered from different depths to retain small and large cell sizes (Protists and bacteria Organisms). The DNA was extracted and amplified by PCR.

Published: September 22, 2022 at 08:44

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00000492.zip

Contacts:

The French National Sequencing Center (Genoscope)
The French National Sequencing Center (Genoscope)

1,500

occurrence records

355

taxa

species

Taxa

Missing and invalid fields

Field	Missing
coordinateUncertaintyInMeters	1,500	100.0%
eventDate	927	61.8%
occurrenceStatus	1,500	100.0%
scientificNameID	1,500	100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
NO_MATCH	512	34.1%
MARINE_UNSURE	127	8.5%
NO_ACCEPTED_NAME	7	0.5%
WORMS_ANNOTATION_UNRESOLVABLE	3	0.2%
NOT_MARINE	2	0.1%

Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for prokaryotes or protist.

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data