Dataset

seawater bacterial community Raw sequence reads

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We report the sediment derived dissolved organic matter degradation in incubation experiment with the overlying seawater, shifts in microbial community structure during the incubation were investigated. Microbial genomic DNA was extracted from the polycarbonate membranes (microbial cells filtered) and the 16S rRNA gene sequences (v3+v4) were amplified by PCR.We classified the OTUs based on their phylogenetic affiliations and determined their relative proportions on the total number of sequencing reads.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00004460.zip

Contacts:

Xiamen University
Xiamen University

4,924
occurrence records
483
taxa
24
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 4,924
100.0%
maximumDepthInMeters 4,924
100.0%
minimumDepthInMeters 4,924
100.0%
occurrenceStatus 4,924
100.0%
scientificNameID 4,924
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 4,924
100.0%
NO_MATCH 1,919
39.0%
MARINE_UNSURE 544
11.0%
NO_ACCEPTED_NAME 15
0.3%
NOT_MARINE 8
0.2%

Measurement types

DNA derived data