Dataset

California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental

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Using metabarcoding of 16S and 18S rRNA, we evaluate variability of prokaryotic and protistan communities in the water column and on particles collected in sediment traps across an inshore-offshore environmental gradient in the California Current System.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00004125.zip

Contacts:

J. Crag Venter Institute
J. Crag Venter Institute

9,915
occurrence records
763
taxa
54
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 9,915
100.0%
occurrenceStatus 9,915
100.0%
scientificNameID 9,915
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_MATCH 3,464
34.9%
MARINE_UNSURE 774
7.8%
NO_ACCEPTED_NAME 42
0.4%
WORMS_ANNOTATION_UNRESOLVABLE 30
0.3%
NOT_MARINE 2
0.0%

Measurement types

DNA derived data