Dataset

marine sediment metagenome Raw sequence reads

OBIS Secretariat Open in mapper Explore occurrences

This dataset contains the bacterial and archaeal 16S rRNA sequence information from the Methane Microbial Observatory for Seafloor Analysis (MIMOSA) deployment at GC600 from October 2013 (PE14-09) to March 2014 (PE14-14). The purpose of the deployment was to examine the in situ degradation of oil. The deployment contained flow-through chambers of sediment, one amended with oil and one unamended. Samples were collected from the beginning and end of the experiment.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00003119.zip

Contacts:

Bigelow Laboratory for Ocean Sciences
Bigelow Laboratory for Ocean Sciences

2,743
occurrence records
359
taxa
6
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 2,743
100.0%
maximumDepthInMeters 2,743
100.0%
minimumDepthInMeters 2,743
100.0%
occurrenceStatus 2,743
100.0%
scientificNameID 2,743
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 2,743
100.0%
NO_MATCH 1,213
44.2%
MARINE_UNSURE 312
11.4%
NO_ACCEPTED_NAME 12
0.4%

Measurement types

DNA derived data