Dataset

COI data from: Environmental DNA metabarcoding differentiates between micro-habitats within the rocky intertidal (Shea & Boehm, 2024)

OBIS USA MeasurementOrFact DNADerivedData Open in mapper Explore occurrences

This is mitochondrial Cytochrome c Oxidase I gene (COI) metabarcoding data of surface seawater metazoan communities from three distinct locations in the rocky intertidal, Pillar Point, Half Moon Bay, California, USA that were sampled over one tidal exposure period on 28 January 2022. This work is associated with a publication in Environmental DNA (https://doi.org/10.1002/edn3.521). [This dataset was processed using the GBIF eDNA converter tool.]

Citation: Shea M M, Boehm A B (2024). COI data from: Environmental DNA metabarcoding differentiates between micro-habitats within the rocky intertidal (Shea & Boehm, 2024). Version 1.5. United States Geological Survey. Occurrence dataset. https://ipt-obis.gbif.us/resource?r=shea_boehm_2024&v=1.5

Published: June 03, 2024 at 16:31

URL: https://ipt-obis.gbif.us/resource?r=shea_boehm_2024

Meghan M. Shea
Stanford University

Alexandria B. Boehm
Stanford University

160,114
occurrence records
320,228
measurements and facts
160,114
sequences
462
taxa
431
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 160,114
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_ACCEPTED_NAME 134,758
84.2%
MARINE_UNSURE 115
0.1%
NOT_MARINE 33
0.0%

Measurement types

DNA derived data