Dataset

COI data from: Environmental DNA metabarcoding differentiates between micro-habitats within the rocky intertidal (Shea & Boehm, 2024)

OBIS USA MeasurementOrFact DNADerivedData Open in mapper Explore occurrences

This is mitochondrial Cytochrome c Oxidase I gene (COI) metabarcoding data of surface seawater metazoan communities from three distinct locations in the rocky intertidal, Pillar Point, Half Moon Bay, California, USA that were sampled over one tidal exposure period on 28 January 2022. This work is associated with a publication in Environmental DNA (https://doi.org/10.1002/edn3.521). [This dataset was processed using the GBIF eDNA converter tool.]

Citation
Shea M M, Boehm A B (2024). COI data from: Environmental DNA metabarcoding differentiates between micro-habitats within the rocky intertidal (Shea & Boehm, 2024). Version 1.5. United States Geological Survey. Occurrence dataset. https://ipt-obis.gbif.us/resource?r=shea_boehm_2024&v=1.5
Published
June 03, 2024 at 16:31
First registration
March 12, 2024 at 23:06
License
This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License
URL
https://ipt-obis.gbif.us/resource?r=shea_boehm_2024
Archive
https://ipt-obis.gbif.us/archive.do?r=shea_boehm_2024

Contacts

Meghan M. Shea
Stanford University

Alexandria B. Boehm
Stanford University

160,114
total submitted occurrences
160,081
accepted occurrences
320,228
measurements and facts
160,114
sequences
462
taxa
431
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 160,114
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_ACCEPTED_NAME 134,758
84.2%
MARINE_UNSURE 115
0.1%
NOT_MARINE 33
0.0%

Measurement types

DNA derived data