Dataset

Microbial community structure or iron oxyhydroxides rich mound in Satsuma Iwo-jima, Japan

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Iron oxyhydroxides rich mounds are observed at the bottom of Nagahama bay where iron and silica rich thermal fluid is discharged. The microbial community structure was investigated using V4 region of 16S rRNA gene.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00004318.zip

Contacts:

JAMSTEC
JAMSTEC

3,842
occurrence records
547
taxa
7
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 3,842
100.0%
maximumDepthInMeters 3,842
100.0%
minimumDepthInMeters 3,842
100.0%
occurrenceStatus 3,842
100.0%
scientificNameID 3,842
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 3,842
100.0%
NO_MATCH 1,768
46.0%
MARINE_UNSURE 560
14.6%
NOT_MARINE 6
0.2%
NO_ACCEPTED_NAME 2
0.1%
WORMS_ANNOTATION_UNRESOLVABLE 1
0.0%

Measurement types

DNA derived data