Dataset

Marine metagenomes Metagenome

OBIS Secretariat Open in mapper Explore occurrences

Marine amplicons from Australian marine (benthic and pelagic environments

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00003194.zip

Contacts:

CSIRO
CSIRO

4,582,446
occurrence records
5,954
taxa
1,976
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 4,582,446
100.0%
maximumDepthInMeters 110,820 56,078
3.6%
minimumDepthInMeters 110,820 56,078
3.6%
occurrenceStatus 4,582,446
100.0%
scientificNameID 4,582,446
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_MATCH 1,432,058
31.3%
ON_LAND 870,955
19.0%
MARINE_UNSURE 320,502
7.0%
NO_DEPTH 166,898
3.6%
NO_ACCEPTED_NAME 31,333
0.7%
DEPTH_EXCEEDS_BATH 25,921
0.6%
WORMS_ANNOTATION_UNRESOLVABLE 9,215
0.2%
NOT_MARINE 6,301
0.1%
WORMS_ANNOTATION_REJECT_AMBIGUOUS 1,175
0.0%
WORMS_ANNOTATION_RESOLVABLE 698
0.0%

Measurement types

DNA derived data