Dataset
OBIS Secretariat Open in mapper Explore occurrences
Environmental impacts from offshore oil and gas activities are currently partly determined by measuring changes in macro-infaunal diversity determined using microscopy. In this study, we evaluated the applicability of using foraminiferal-specific metabarcoding (i.e. high-throughput sequencing of foraminiferal environmental DNA marker sequences). Sediment samples were collected along distance gradients from two oil platform wellheads (WHs) off Taranaki (New Zealand) and their physico-chemical properties, foraminiferal environmental DNA/RNA, and macro-infaunal composition analysed.Our results suggest that foraminiferal metabarcoding may provide a more accurate assessment of the conditions of environmental communities at the time of sampling than current methods based on morphological examination. These data highlight the potential of foraminiferal metabarcoding as an effective asset to existing monitoring techniques.
Published: September 20, 2022 at 12:42
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License
URL: https://hosted-datasets.gbif.org/mgnify/MGYS00004307.zip
Contacts:
University of Geneva
University of Geneva
| Field | Missing | Invalid | |
|---|---|---|---|
| coordinateUncertaintyInMeters | 233 |
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| occurrenceStatus | 233 |
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| scientificNameID | 233 |
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The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.
| Flag | Dropped | Records | |
|---|---|---|---|
| NO_MATCH | 40 |
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| MARINE_UNSURE | 8 |
|
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| NO_ACCEPTED_NAME | 2 |
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| WORMS_ANNOTATION_UNRESOLVABLE | 2 |
|