Dataset
OBIS Colombia Open in mapper Explore occurrences
The study of the marine microbiome is essential to understanding the health of our oceans and their impact on the planet. These microorganisms play a crucial role in the regulation of biogeochemical cycles, oxygen production, degradation of pollutants and the marine food chain. In addition, the marine microbiome influences the global climate and is a valuable resource for biotechnology and medicine. Investigating this microscopic world helps us protect our marine ecosystems and address urgent environmental challenges. DNA analysis through techniques such as amplicon sequencing (metabarcoding) allows the identification of both prokaryotic and eukaryotic microbial species in water samples. Metagenomics, on the other hand, gives us the ability to sequence all the genes present in the microbiome, providing information about gene abundances involved in metabolic pathways (profiles functional) and at different taxonomic levels (taxonomic profiles). Ocean Sampling Day (OSD) is a global scientific campaign that aims to analyze marine biodiversity and microbial function using molecular sequencing techniques. This dataset contains 2 occurrences that were taken in Puerto Colombia and Barranquilla the 9th of september 2023, both are identified up to domain Eukarya and Prokaryota.
Citation: Gutiérrez Castañeda C G, Huber P, Barraza Amador B C, Sarmento H, Arboleda Baena C M, Rovira Mariano T D J (2025): All Atlantic ocean sampling day South America. v1.0. Universidad Libre. Dataset/Samplingevent. https://ipt.biodiversidad.co/sib/resource?r=unilibre_red_aa-osd&v=1.0
Published: March 14, 2025 at 14:08
License: This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License
URL: https://ipt.biodiversidad.co/sibm/resource?r=unilibre_red_aa-osd
Contacts:
Clara Gilma Gutiérrez Castañeda
Universidad Libre Seccional Barranquilla
Paula Huber
Universidade Federal de São Carlos Departamento de Hidrobiologia: Sao Carlos, SP, BR
Beatriz Cecilia Barraza Amador
Universidad Libre Seccional Barranquilla
Hugo Sarmento
Universidade Federal de São Carlos
Clara María Arboleda Baena
Universidade Federal de São Carlos
Teodoro de Jesús Rovira Mariano
Universidad Libre Seccional Barranquilla
Clara María Arboela Baena
Universidad Libre - Campus Barranquilla
| Field | Missing | Invalid | |
|---|---|---|---|
| coordinateUncertaintyInMeters | 2 |
|
|
| maximumDepthInMeters | 2 |
|
|
| minimumDepthInMeters | 2 |
|
The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.
| Flag | Dropped | Records | |
|---|---|---|---|
| NO_DEPTH | 2 |
|