Dataset

Ecological Genomics of the Eastern Tropical South Pacific Oxygen Minimum Zone Metagenome

OBIS Secretariat Open in mapper Explore occurrences

Oxygen minimum zones (OMZs) are oxygen deficient regions of the ocean that are hotspots for nutrient and climate active trace gas cycling. Forming at intermediate depths (~1001000 m) in response to high biological oxygen demand and reduced ventilation, OMZs occur naturally in regions of high productivity and nutrient-rich upwelling. Global climate change and enhanced run-off from our farms and cities also contributes to OMZ formation and expansion. An expansive and permanent OMZ persists in the Eastern Tropical South Pacific (ETSP) along the coast of northern Chile and Peru. Studies in the ETSP-OMZ have been critical in charting the microbial communities and metabolic processes driving coupled biogeochemical cycling in coastal and open ocean OMZs throughout the global ocean.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00004068.zip

Contacts:

University of British Columbia
University of British Columbia

645
occurrence records
150
taxa
2
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 645
100.0%
maximumDepthInMeters 645
100.0%
minimumDepthInMeters 645
100.0%
occurrenceStatus 645
100.0%
scientificNameID 645
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 645
100.0%
NO_MATCH 220
34.1%
MARINE_UNSURE 44
6.8%
WORMS_ANNOTATION_UNRESOLVABLE 5
0.8%
NO_ACCEPTED_NAME 1
0.2%

Measurement types

DNA derived data