Dataset

Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for large DNA viruses.

Name: Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for large DNA viruses.
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

OBIS Secretariat Open in mapper Explore occurrences

Seawater was filtered from different depths to retain small cell sizes (Girus Organisms). The DNA was extracted and amplified by PCR.

Published: September 22, 2022 at 08:44

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00001811.zip

Contacts:

The French National Sequencing Center (Genoscope)
The French National Sequencing Center (Genoscope)

187

occurrence records

taxa

species

Taxa

Missing and invalid fields

Field	Missing
coordinateUncertaintyInMeters	187	100.0%
occurrenceStatus	187	100.0%
scientificNameID	187	100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
NO_MATCH	55	29.4%
WORMS_ANNOTATION_UNRESOLVABLE	17	9.1%
MARINE_UNSURE	14	7.5%

Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for large DNA viruses.

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data