Dataset

13C methanol SIP (WCO station L4)

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Methanol is a biochemically active, volatile organic compound that plays an important role in tropospheric oxidant photochemistry. It has recently been suggested that the global ocean, where surface methanol concentrations are in the ~30-400 nM range, is a net sink for atmospheric methanol. In the marine environment, this (and other) one-carbon compound is used as an energy and carbon source by bacteria known as methylotrophs. So far, little is known about the identity of the active methanol oxidisers in marine habitats. In this study, Stable Isotope Probing using 13C labelled methanol was combined with 16S rRNA and functional gene amplicon sequencing as well as metagenome sequencing to identify methylotrophic bacteria that are responsible for methanol assimilation in samples obtained from the Western Channel Observatory station L4.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00004590.zip

Contacts:

University of East Anglia
University of East Anglia

498
occurrence records
114
taxa
3
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 498
100.0%
occurrenceStatus 498
100.0%
scientificNameID 498
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_MATCH 172
34.5%
MARINE_UNSURE 15
3.0%
NO_ACCEPTED_NAME 4
0.8%

Measurement types

DNA derived data