Dataset

CCA_pathobiome

OBIS Secretariat Open in mapper Explore occurrences

Coralline algae are major benthic calcifiers that play crucial roles in coral reef ecosystems. In this study, we provide data from the first investigation of the bacterial communities associated with healthy and diseased corallines. We target two diseases?Coralline White Band Syndrome (CWBS) and Coralline White Patch Disease (CWPD)?and show that they are associated with different pathobiomes, which indicates different disease causations.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00002996.zip

Contacts:

Observatoire Oceanologique de Banyuls
Observatoire Oceanologique de Banyuls

13,433
occurrence records
730
taxa
89
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 13,433
100.0%
decimalLatitude 1,718
12.8%
decimalLongitude 1,718
12.8%
eventDate 1,718
12.8%
maximumDepthInMeters 13,433
100.0%
minimumDepthInMeters 13,433
100.0%
occurrenceStatus 13,433
100.0%
scientificNameID 13,433
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 13,433
100.0%
NO_MATCH 5,040
37.5%
NO_COORD 1,718
12.8%
MARINE_UNSURE 1,198
8.9%
NOT_MARINE 39
0.3%
NO_ACCEPTED_NAME 13
0.1%
WORMS_ANNOTATION_REJECT_AMBIGUOUS 8
0.1%
WORMS_ANNOTATION_UNRESOLVABLE 2
0.0%

Measurement types

DNA derived data