Dataset

15N methylamine SIP (WCO station L4)

OBIS Secretariat Open in mapper Explore occurrences

Methylated amine compounds such as methylamine are important sources of nitrogen for microorganisms in marine habitats. Methylamine is a volatile organic compound generated by degradation of organic matter. The biodegradation of methylamine by marine microorganisms is a major factor modulating the emission of this compound into the atmosphere, where methylamine influences global climate processes. As methylamine contains carbon as well as nitrogen, it can serve as a source of both elements for microorganisms So far, little is known about the identity of the active methylamine oxidisers in marine habitats, especially regarding organisms that use methylamine as a nitrogen source. In this study, Stable Isotope Probing using 15N labelled methylamine was combined with 16S rRNA and functional gene amplicon sequencing as well as metagenome sequencing to identify bacteria that are involved in methylamine degradation or assimilation of methylamine derived nitrogen in samples obtained from the Western Channel Observatory station L4.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00002815.zip

Contacts:

University of East Anglia
University of East Anglia

3,739
occurrence records
268
taxa
7
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 3,739
100.0%
maximumDepthInMeters 3,739
100.0%
minimumDepthInMeters 3,739
100.0%
occurrenceStatus 3,739
100.0%
scientificNameID 3,739
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 3,739
100.0%
NO_MATCH 1,295
34.6%
MARINE_UNSURE 301
8.1%
NO_ACCEPTED_NAME 20
0.5%

Measurement types

DNA derived data