Name: Trichodesmium spiralis associated microbiome Targeted loci
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

We sequenced 16S rRNA gene amplicons of samples collected from Trichodesmium spiralis colonies and filtered seawater obtained concomitantly to determine the microbiome of this Cyanobacterium in comparison with the community structure of the surrounding seawater.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00003003.zip

Contacts:

University of Hawaii
University of Hawaii

5,443

occurrence records

445

taxa

species

Taxa

Missing and invalid fields

Field	Missing
coordinateUncertaintyInMeters	5,443	100.0%
maximumDepthInMeters	5,443	100.0%
minimumDepthInMeters	5,443	100.0%
occurrenceStatus	5,443	100.0%
scientificNameID	5,443	100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
NO_DEPTH	5,443	100.0%
NO_MATCH	1,707	31.4%
MARINE_UNSURE	473	8.7%
NOT_MARINE	18	0.3%
NO_ACCEPTED_NAME	17	0.3%

Trichodesmium spiralis associated microbiome Targeted loci

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data