Dataset

Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015

OBIS Secretariat Open in mapper Explore occurrences

The overall objective of this project (Baselines Initiative) is to generate several 16S rRNA gene databases to establish robust baseline information on the biological communities in marine ecosystems. This field study was conducted in the Bay of Bengal in Auguest-September 2015 to examine phytoplankton community diversity.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00002490.zip

Contacts:

Monterey Bay Aquarium Research Institute
Monterey Bay Aquarium Research Institute

15,277
occurrence records
819
taxa
71
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 15,277
100.0%
maximumDepthInMeters 5,946
38.9%
minimumDepthInMeters 5,946
38.9%
occurrenceStatus 15,277
100.0%
scientificNameID 15,277
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 5,946
38.9%
NO_MATCH 5,883
38.5%
MARINE_UNSURE 1,917
12.5%
NO_ACCEPTED_NAME 55
0.4%
NOT_MARINE 19
0.1%
WORMS_ANNOTATION_REJECT_AMBIGUOUS 1
0.0%

Measurement types

DNA derived data