Name: Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

This project studies the microbial communities within the Mariana and Kermadec trenches as a function of trench, sediment, and water depth using 16S rRNA gene sequencing.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00002605.zip

Contacts:

Scripps Institution of Oceanography
Scripps Institution of Oceanography

48,580

occurrence records

1,198

taxa

species

Taxa

Missing and invalid fields

Field	Missing
coordinateUncertaintyInMeters	48,580	100.0%
occurrenceStatus	48,580	100.0%
scientificNameID	48,580	100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
NO_MATCH	21,044	43.3%
MARINE_UNSURE	6,329	13.0%
NOT_MARINE	98	0.2%
WORMS_ANNOTATION_UNRESOLVABLE	86	0.2%
NO_ACCEPTED_NAME	76	0.2%

Mariana and Kermadec Trench sediment 16S rRNA gene sequencing

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data