Dataset

Microbial diversity studies of Arabian Sea sediment

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Marine ecosystems are distinctive ecological niche, with a variety of microbes playing important roles in nutrient recycling and other ecological processes, thereby requiring a thorough exploration of their microflora. Similarly Arabian Sea sediments are hotspots for microbial diversity and therefore requires a detailed investigation. Bacterial diversity profiles of marine metagenome were brought to light by the present studies based on Illumina sequencing trageting the V3 regions of 16S rRNA gene, revealing the roles of different bacteria in nutrient cycling and organic matter degradation. The analysis also revealed the existence of many unknown sequences, indicating a large untapped bacterial diversity in these areas.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00002375.zip

Contacts:

Cochin University of Science and Technology
Cochin University of Science and Technology

1,207
occurrence records
613
taxa
12
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 1,207
100.0%
maximumDepthInMeters 1,207
100.0%
minimumDepthInMeters 1,207
100.0%
occurrenceStatus 1,207
100.0%
scientificNameID 1,207
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 1,207
100.0%
NO_MATCH 556
46.1%
MARINE_UNSURE 201
16.7%
NOT_MARINE 2
0.2%
NO_ACCEPTED_NAME 2
0.2%

Measurement types

DNA derived data