Dataset

Environmental eukaryotes Metagenome

OBIS Secretariat Open in mapper Explore occurrences

18S sequences from environmental samples using universal eukaryote primers. The goal of the study is to design and test eukaryote specific primers to be used in assessing biodiversity of eukaryotes.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00004132.zip

Contacts:

University of Bergen
University of Bergen

3,221
occurrence records
1,061
taxa
192
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 3,221
100.0%
occurrenceStatus 3,221
100.0%
scientificNameID 3,221
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
DEPTH_EXCEEDS_BATH 2,297
71.3%
ON_LAND 2,297
71.3%
NO_MATCH 582
18.1%
MARINE_UNSURE 123
3.8%
NO_ACCEPTED_NAME 62
1.9%
NOT_MARINE 16
0.5%
WORMS_ANNOTATION_REJECT_AMBIGUOUS 4
0.1%
WORMS_ANNOTATION_RESOLVABLE 3
0.1%
WORMS_ANNOTATION_UNRESOLVABLE 3
0.1%

Measurement types

DNA derived data