Name: Metagenomic community analysis of marine zooplankton using two plankton nets
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

Metagenomic analysis was conducted to evaluate effects of plankton nets on marine zooplankton community. Zooplankton samples were collected in the coastal water off Japan, using two types of plankton nets. PCR was performed to amplify 18S V7-V9 regions, and the 454-pyrosequencing run was carried out .

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00002771.zip

Contacts:

FISHRA
FISHRA

2,080

occurrence records

348

taxa

species

Taxa

Missing and invalid fields

Field	Missing	Invalid
coordinateUncertaintyInMeters	2,080		100.0%
maximumDepthInMeters		2,080	100.0%
minimumDepthInMeters		2,080	100.0%
occurrenceStatus	2,080		100.0%
scientificNameID	2,080		100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
NO_DEPTH	2,080	100.0%
ON_LAND	2,080	100.0%
NO_MATCH	295	14.2%
NO_ACCEPTED_NAME	47	2.3%
WORMS_ANNOTATION_UNRESOLVABLE	46	2.2%
MARINE_UNSURE	39	1.9%
NOT_MARINE	2	0.1%
WORMS_ANNOTATION_REJECT_AMBIGUOUS	2	0.1%
WORMS_ANNOTATION_RESOLVABLE	1	0.0%

Metagenomic community analysis of marine zooplankton using two plankton nets

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data