Dataset

Larvae collected near deep-sea hydrothermal vent fields for microbiome study

OBIS USA Open in mapper Explore occurrences

This dataset provides the sampling locations and identifications for a total of 60 larvae collected near deep-sea hydrothermal vent fields and used in a microbiome study by Carrier et al. (2020, submitted). The larvae were collected near hydrothermal vent fields on the East Pacific Rise (EPR 9°50'N vent field), on the Mariana Back-Arc Spreading Center (near Snail and Archaean vent fields), and in Pescadero Basin (Auka vent field) in the Gulf of California. This dataset is derived from a dataset in the Biological and Chemical Oceanography Data Management Office (BCO-DMO) repository (Beaulieu et al., 2021, doi:10.26008/1912/bco-dmo.839476.1) with the addition of two Darwin Core terms recommended for the Global Biodiversity Information Facility (GBIF; countryCode and kingdom). See the dataset in BCO-DMO for acquisition description, data columns removed that were not in the Darwin Core standard (e.g., Lowest_level_taxon_name_or_morphotype, microbiome_16S_Dryad), and associatedMedia. Note that the use of the Darwin Core term habitat differs from the standard definition; we describe the habitat as "hydrothermal vent" ENVO term http://purl.obolibrary.org/obo/ENVO_00000215 for those taxa for which we are confident that the adults live at a hydrothermal vent, otherwise NotDetermined. Funding to collect specimens was from the U.S. National Science Foundation (NSF) OCE-0424953 and OCE-1028862 and the Dalio Explore Fund, and funding to standardize these data to Darwin Core for sharing through the Ocean Biodiversity Information System was from NSF DEB-1558904 and OCE-1829773.

Published: May 31, 2021 at 13:21

URL: https://ipt-obis.gbif.us/resource?r=whoi_deep_sea_larvae_microbiome

Tyler Carrier
University of North Carolina at Charlotte

Adam Reitzel
University of North Carolina at Charlotte

60
occurrence records
13
taxa

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 60
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

No quality flags.

Measurement types

DNA derived data