Dataset
SWP OBIS DNADerivedData Open in mapper Explore occurrences
This dataset contains the eDNA data collected in Suva, Fiji by the PacMAN project. PacMAN (Pacific islands Marine bioinvasions Alert Network) is developing an invasive species monitoring system as well as an early-warning decision-support tool for Pacific Island States. Occurrences were generated by COI and 18S metabarcoding of water samples as well as settlement plates, and processing of barcode sequences using the PacMAN bioinformatics pipeline (https://github.com/iobis/PacMAN-pipeline). The full sampling protocol is available as part of the PacMAn monitoring plan (https://unesdoc.unesco.org/ark:/48223/pf0000379204.locale=en).
Published: September 09, 2024 at 12:27
URL: https://nzobisipt.niwa.co.nz/resource?r=pacman_suva_edna
Pieter Provoost
UNESCO
Saara Suominen
UNESCO
Joape Ginigini
University of the South Pacific
Miriama Vuiyasawa
University of the South Pacific
| Field | Missing | Invalid | |
|---|---|---|---|
| coordinateUncertaintyInMeters | 401,021 |
|
|
| decimalLatitude | 1,780 |
|
|
| decimalLongitude | 1,780 |
|
|
| eventDate | 87 |
|
|
| maximumDepthInMeters | 401,021 |
|
|
| minimumDepthInMeters | 401,021 |
|
|
| scientificNameID | 225,034 | 1,007 |
|
The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.
| Flag | Dropped | Records | |
|---|---|---|---|
| NO_DEPTH | 401,021 |
|
|
| NO_MATCH | 212,661 |
|
|
| ON_LAND | 187,174 |
|
|
| WORMS_ANNOTATION_UNRESOLVABLE | 128,285 |
|
|
| NO_ACCEPTED_NAME | 19,517 |
|
|
| NO_COORD | 1,780 |
|
|
| MARINE_UNSURE | 1,770 |
|
|
| NOT_MARINE | 1,176 |
|