Name: Metagenomic investigation of the coastal region of south Gujarat using soil sample - Nargol, Umargam and Dandi
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

metagenomic investigation of the coastal region of south Gujarat. Soil and water samples were collected and pooled from three different location; dandi, umargam and nargol. From the pooled sample, environmental metagenomic DNA was isolated followed by WGS using Illumina Miseq platform.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00001430.zip

Contacts:

Veer Narmad South Gujarat University
Veer Narmad South Gujarat University

2,009

occurrence records

629

taxa

species

Taxa

Missing and invalid fields

Field	Missing
coordinateUncertaintyInMeters	2,009	100.0%
eventDate	2,009	100.0%
occurrenceStatus	2,009	100.0%
scientificNameID	2,009	100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
ON_LAND	1,430	71.2%
NO_MATCH	886	44.1%
MARINE_UNSURE	205	10.2%
NOT_MARINE	6	0.3%
NO_ACCEPTED_NAME	6	0.3%
WORMS_ANNOTATION_UNRESOLVABLE	3	0.1%
WORMS_ANNOTATION_RESOLVABLE	1	0.0%

Metagenomic investigation of the coastal region of south Gujarat using soil sample - Nargol, Umargam and Dandi

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data