Dataset

marine sediment metagenome Raw sequence reads

OBIS Secretariat Open in mapper Explore occurrences

to compare the differences among these environmental samples

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00003079.zip

Contacts:

Hainan university
Hainan university

9,742
occurrence records
692
taxa
16
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 9,742
100.0%
maximumDepthInMeters 9,742
100.0%
minimumDepthInMeters 9,742
100.0%
occurrenceStatus 9,742
100.0%
scientificNameID 9,742
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 9,742
100.0%
NO_MATCH 4,603
47.2%
MARINE_UNSURE 1,241
12.7%
NOT_MARINE 34
0.3%
NO_ACCEPTED_NAME 14
0.1%
WORMS_ANNOTATION_UNRESOLVABLE 1
0.0%

Measurement types

DNA derived data