Dataset
OBIS Secretariat DNADerivedData Open in mapper Explore occurrences
This dataset contains the eDNA data collected as a part of the UNESCO eDNA expeditions in Marine World Heritage Sites project in 2022-2024. The project was coordinated in collaboration with the Ocean Biodiversity Information System (OBIS) of IOC-UNESCO and the marine programme of the UNESCO World Heritage Center, and funded by the government of Flanders (Kingdom of Belgium). The samples were collected with citizen science eDNA sampling kits, containing a syringe and a filter, and preserved with Longmire's buffer, before sequencing at a central laboratory. Five different biomarkers were analysed, including 12SMifish, Mimammal, Teleo, 16S-Vert and COI markers. The sequences were analysed with the PacMAN pipeline and quality controlled including a validation check by local scientists and site managers as well as compared to existing knowledge on species distributions in OBIS and GBIF. The full sampling protocols and materials are available on the project website (https://www.unesco.org/en/edna-training-materials?hub=66910), and the bioinformatics pipeline is on github (https://github.com/iobis/PacMAN-pipeline). The data can also be explored on the eDNA expeditions dashboard (https://dashboard.ednaexpeditions.org/).
Citation: Melesio Tiscareño Villorin J, Erendida Frías Hernández L, Hernández González O, Rivera Reyes N, Berumen Solórzano P, Vargas Cossio P, Ávila García B, Guadalupe Villavicencio Rousseau G, López Payán F, Munguia Vega A, Manuel Duarte Ramos F, Carlos Fernando San Esteban Belmar J, Suominen S, Provoost P, Gillard E, Douvere F, Appeltans W (2024). UNESCO eDNA expedition in Archipiélago de Revillagigedo (Mexico): April 2023. Version 2.0. OBIS Secretariat. Occurrence dataset. https://doi.org/10.25607/mp4qin
Published: December 08, 2024 at 17:21
License: To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0)
URL: https://ipt.obis.org/secretariat/resource?r=edna-archipielago-de-revillagigedo
Contacts:
Josué Melesio Tiscareño Villorin
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico
Luz Erendida Frías Hernández
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico
Osvaldo Hernández González
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico
Nathaniel Rivera Reyes
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico
Penélope Berumen Solórzano
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico
Paul Vargas Cossio
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico
Blas Ávila García
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico
Georgina Guadalupe Villavicencio Rousseau
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico
Fátima López Payán
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico
Adrián Munguia Vega
Conservation Genetics Lab, University of Arizona, United States of America
Fernando Manuel Duarte Ramos
Autonomus University of Baja California Sur, Mexico
José Carlos Fernando San Esteban Belmar
Autonomus University of Baja California Sur, Mexico
Saara Suominen
UNESCO-IOC
Pieter Provoost
UNESCO-IOC
Elle Gillard
UNESCO-WHC
Fanny Douvere
UNESCO-WHC
Ward Appeltans
UNESCO-IOC
| Field | Missing | Invalid | |
|---|---|---|---|
| coordinateUncertaintyInMeters | 178,507 |
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| maximumDepthInMeters | 178,507 |
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| minimumDepthInMeters | 178,507 |
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| scientificNameID | 32 |
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