Dataset

UNESCO eDNA expedition in Archipiélago de Revillagigedo (Mexico): April 2023

OBIS Secretariat DNADerivedData Open in mapper Explore occurrences

This dataset contains the eDNA data collected as a part of the UNESCO eDNA expeditions in Marine World Heritage Sites project in 2022-2024. The project was coordinated in collaboration with the Ocean Biodiversity Information System (OBIS) of IOC-UNESCO and the marine programme of the UNESCO World Heritage Center, and funded by the government of Flanders (Kingdom of Belgium). The samples were collected with citizen science eDNA sampling kits, containing a syringe and a filter, and preserved with Longmire's buffer, before sequencing at a central laboratory. Five different biomarkers were analysed, including 12SMifish, Mimammal, Teleo, 16S-Vert and COI markers. The sequences were analysed with the PacMAN pipeline and quality controlled including a validation check by local scientists and site managers as well as compared to existing knowledge on species distributions in OBIS and GBIF. The full sampling protocols and materials are available on the project website (https://www.unesco.org/en/edna-training-materials?hub=66910), and the bioinformatics pipeline is on github (https://github.com/iobis/PacMAN-pipeline). The data can also be explored on the eDNA expeditions dashboard (https://dashboard.ednaexpeditions.org/).

Citation: Melesio Tiscareño Villorin J, Erendida Frías Hernández L, Hernández González O, Rivera Reyes N, Berumen Solórzano P, Vargas Cossio P, Ávila García B, Guadalupe Villavicencio Rousseau G, López Payán F, Munguia Vega A, Manuel Duarte Ramos F, Carlos Fernando San Esteban Belmar J, Suominen S, Provoost P, Gillard E, Douvere F, Appeltans W (2026). UNESCO eDNA expedition in Archipiélago de Revillagigedo (Mexico): April 2023. Version 2.1. OBIS Secretariat. Occurrence dataset. https://doi.org/10.25607/mp4qin

Published: April 09, 2026 at 20:46

First registration: December 08, 2024 at 09:49

License: To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0)

URL: https://ipt.obis.org/secretariat/resource?r=edna-archipielago-de-revillagigedo

Contacts:

Josué Melesio Tiscareño Villorin
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico

Luz Erendida Frías Hernández
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico

Osvaldo Hernández González
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico

Nathaniel Rivera Reyes
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico

Penélope Berumen Solórzano
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico

Paul Vargas Cossio
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico

Blas Ávila García
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico

Georgina Guadalupe Villavicencio Rousseau
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico

Fátima López Payán
Revillagigedo National Park, National Commission of Protected Natural Areas - CONANP, Mexico

Adrián Munguia Vega
Conservation Genetics Lab, University of Arizona, United States of America

Fernando Manuel Duarte Ramos
Autonomus University of Baja California Sur, Mexico

José Carlos Fernando San Esteban Belmar
Autonomus University of Baja California Sur, Mexico

Saara Suominen
UNESCO-IOC

Pieter Provoost
UNESCO-IOC

Elle Gillard
UNESCO-WHC

Fanny Douvere
UNESCO-WHC

Ward Appeltans
UNESCO-IOC

189,284
occurrence records
189,284
sequences
635
taxa
338
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 189,284
100.0%
maximumDepthInMeters 189,284
100.0%
minimumDepthInMeters 189,284
100.0%
scientificNameID 114,041 23
60.3%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 189,284
100.0%
NO_MATCH 113,710
60.1%
NO_ACCEPTED_NAME 29,567
15.6%
MARINE_UNSURE 65
0.0%
NOT_MARINE 18
0.0%

Measurement types

DNA derived data