Dataset

Socompa Lake Stromatolite Shotgun Metagenomic Sequencing

OBIS Secretariat Open in mapper Explore occurrences

With the altitude of 3570 m, this is so far the highest site where actively forming non-lithified stromatolites have been found, located at the shore of a volcanic, alkaline lake Socompa (Argentina). These microbial communities are a hotspot of biodiversity thriving under harsh environmental conditions that might be compared to Early Earth. This study uses a WGS strategy to understand the unique community composition and the mechanisms used by their members to withstand the extreme environment.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00004555.zip

Contacts:

CONICET
CONICET

933
occurrence records
488
taxa
32
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 933
100.0%
maximumDepthInMeters 933
100.0%
minimumDepthInMeters 933
100.0%
occurrenceStatus 933
100.0%
scientificNameID 933
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 933
100.0%
ON_LAND 933
100.0%
NO_MATCH 425
45.6%
MARINE_UNSURE 123
13.2%
NOT_MARINE 2
0.2%
NO_ACCEPTED_NAME 1
0.1%
WORMS_ANNOTATION_UNRESOLVABLE 1
0.1%

Measurement types

DNA derived data