Name: Vibrio-specific 16S rRNA sequences from seawater, sediment, and oyster hatchery samples
License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

Vibrionaceae rRNA sequences from seawater, sediment, and oyster hatchery samples. Vibrio-specific 16S rRNA genes were amplified using VF169 and 680R primers (Yong et al. 2006, Thompson et al. 2004) and sequenced on the Illumina MiSeq.

Published: September 20, 2022 at 12:42

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00002669.zip

Contacts:

Oregon State University
Oregon State University

4,496

occurrence records

129

taxa

species

Taxa

Missing and invalid fields

Field	Missing
coordinateUncertaintyInMeters	4,496	100.0%
maximumDepthInMeters	4,496	100.0%
minimumDepthInMeters	4,496	100.0%
occurrenceStatus	4,496	100.0%
scientificNameID	4,496	100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag	Records
NO_DEPTH	4,496	100.0%
NO_MATCH	1,041	23.2%
ON_LAND	613	13.6%
MARINE_UNSURE	33	0.7%

Vibrio-specific 16S rRNA sequences from seawater, sediment, and oyster hatchery samples

Taxa

Missing and invalid fields

Quality flags

Measurement types

DNA derived data