Dataset

marine metagenome Metagenome

OBIS Secretariat Open in mapper Explore occurrences

To study the effect of diesel oil spills on microbial communities in the monitored basin experiment

Published: September 22, 2022 at 08:44

License: This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY) 4.0 License

URL: https://hosted-datasets.gbif.org/mgnify/MGYS00005175.zip

Contacts:

University of Helsinki
University of Helsinki

493,938
occurrence records
2,941
taxa
459
species

Taxa

Missing and invalid fields

Field Missing Invalid
coordinateUncertaintyInMeters 493,938
100.0%
maximumDepthInMeters 411,800 82,138
100.0%
minimumDepthInMeters 411,800 82,138
100.0%
occurrenceStatus 493,938
100.0%
scientificNameID 493,938
100.0%

Quality flags

The OBIS data quality flags are documented at https://github.com/iobis/obis-qc.

Flag Dropped Records
NO_DEPTH 493,938
100.0%
NO_MATCH 228,791
46.3%
ON_LAND 82,138
16.6%
MARINE_UNSURE 67,331
13.6%
NOT_MARINE 799
0.2%
NO_ACCEPTED_NAME 794
0.2%
WORMS_ANNOTATION_UNRESOLVABLE 507
0.1%
WORMS_ANNOTATION_RESOLVABLE 3
0.0%
WORMS_ANNOTATION_REJECT_AMBIGUOUS 1
0.0%

Measurement types

DNA derived data